Tag Archives: scholarly communication

Tales of Discovery: stories inspired by Cambridge research

Five research papers and five traditional stories were combined during Cambridge Science Festival in March 2018 to make Tales of Discovery.

The session was aimed at families, to show them that there is a world of research available to the general public stored on Apollo, the University’s repository – and it’s all cool stuff.

It was also aimed at researchers, to get them thinking about new ways to make their research available to a general public – including uploading their research on to the Apollo repository.

At the end of each story the audience were challenged to interpret the stories and research in their own way.

Here’s what happened during the morning.

Labour Pains: Scenes of Birth and Becoming in Old Norse Legendary Literature

The research

Kate Olley’s article looks at the drama of childbirth as depicted in Old Norse legendary literature. This article made a great beginning to the session, because it looks into the power of story to give an insight into the past. Childbirth stories are fascinating and informative because they are such important moments – ‘moments of crisis’ not just for an individual but for a whole society. They show so much about a culture, from the details of everyday life, to a picture of a society’s values and structure. Also, unlike stories of great battles and adventures, they put women and everyday life at the centre of the story.

The story

I retold one of the stories from Kate’s article, ‘Hrolf and the elvish woman’ from the saga of Hrolf the Walker. An elvish woman summons Hrolf, a king who has fallen on hard times, to help her daughter who is under a curse. She has been in labour for 19 days, but cannot give birth unless she is touched by human hands.

Kate pointed out some things the story shows us: the extreme danger of childbirth in those times; and the way a birth changes everybody’s role. The woman becomes a mother, but the fortunes of Hrolf the midwife are also changed for ever. 

The challenge

We talked about how people still tell childbirth stories, and they often have the same mythic resonances as old Icelandic saga. Is there a story you tell your children about when they were a baby? (or a story that your parents tell you?)

Revolutionising Computing Infrastructure for Citizen Empowerment

The research

‘Internet dragon’

Noa Zilberman explains that almost every aspect of our lives today is being digitally monitored: from our social networks activity, through online shopping habits to financial records. Can new technology enable us to choose who holds this data? Her research, based on highly technical computer engineering, addresses a social issue that Noa feels passionate about. I chose a story that was a metaphor for her research, with a hero taking on the might of a huge and greedy dragon.

The story

‘Dragon’

I based the story on the epic account of Beowulf fighting the dragon, which reflected Noa’s passion and how important she felt the issues raised by her research are to society in general. But, as is the way with story, more links emerged during the telling. The flickering flames of the dragon’s cave, reflected the heat emitted by internet server farms. The ease with which a thief can steal gold from the hoard, and the potential harm this can do, proved highly topical. When the hero asks the blacksmith to make a shield of metal to protect him from the dragon’s breath, Noa produced her secret weapon: a programmable board, not more than six inches long, which enables data to be moved more efficiently by individual computers.

The challenge

It can be hard to visualise what ‘the internet’ really is. What might an ‘internet dragon’ look like? Can you draw one?

The provenance, date and significance of a Cook-voyage Polynesian sculpture

The research

Trisha Biers paper sheds light on the shifting sands of anthropological investigation. It has a particular Cambridge link: she uncovers the secrets of a wooden carving brought back from Captain Cook’s voyage to the Pacific in the 18th Century. The mysterious carving – of two figures and a dog – is now the logo of the Museum of Archaeology and Anthropology.

The story

Two men and pig

As I searched for a Polynesian story about two men and a dog, I discovered many of the same factors that Trisha highlights. Stories travel across the Pacific Ocean just as commerce, people, and artworks do, making it hard to pinpoint the source of the story.

The story I chose, about the deity/hero Maui, turning his annoying brother-in-law, Irawaru, into the first dog, fits only partially – just like the many theories about the carving. Stories about Maui are known all over Polynesia: but the trickster Maui from New Zealand, where this story comes from, is different from the godlike Maui of Tahiti, the carving’s likely provenance. Like the carving, the stories of Maui have travelled to the Western world, in films like Moanna, as well as to Cambridge. Stories, which can’t be carbon-dated like the carving, shift and change just like the dog Irawaru.

The challenge

Not knowing the true story can set our imaginations free! I asked the audience to draw or write their own story about two men and a dog.

Treated Incidence of Psychotic Disorders in the Multinational EU-GEI Study

The research

Hannah Jongsma’s research looks at the risk of developing a psychotic disorder, which for a long time was thought to be due to genetics. She finds that it is influenced by many factors – both genetic and environmental – for example the risk is higher in young men and ethnic minorities.

The story

I paired the story with a sinister little tale from Grimm, Bearskin, about an outsider who is rejected by society because of his wild appearance – he wears the unwashed skin of a ferocious bear and lives like a wild man. It touched the issues of Hannah’s research at many points. The hero is a rootless and penniless young man far from home – a situation identified as high-risk in Hannah’s study. His encounter with a wild bear with whom he swaps coats is the stuff of hallucination. Like psychosis, in Hannah’s view, the problem is partly one of the way society views the outsider. And, as in Hannah’s study, being accepted by a family and given emotional support is a protection against psychosis. The remarkable thing about this this wonder-tale, so far removed from reality, was how it opened up a wide-ranging conversation about the research. Its far-fetched images helped us explore the issues of real-life research. Hannah was surprised that her research could be re-envisioned and presented in such a different way.

The challenge

Using the ideas from Hannah’s paper, suggest an alternative ending to the story.

Determining the Molecular Pathology of Inherited Retinal Disease

The research

‘DNA helix’

Crina Samarghitean shows how bioinformatics tools help researchers find new genes, and doctors find diagnosis in difficult disorders. Her article looks at better treatment and quality of life for patients with primary immunodeficiencies, and focuses on inherited retinal disease which is a common cause of visual impairment.

The story

The story of the telescope, the carpet and the lemon turned out to be a celebration of the possibilities of medical research with bioinformatics. Three brothers search for the perfect gift to win the heart of the princess, and find that these three magical objects allow them to save her life. This piece of research was the first one I tried to find a story for, and it seemed to be the hardest to translate into non-specialist language, until Crina said ‘I see the research as a quest for treasure: someone who has looked everywhere for a cure for their illness comes to this data-bank, and it’s like a treasure chest with the answer to their problem.’

The challenge

Crina is already committed to the idea that the arts can be used to interpret science. She has made artworks inspired by the gene sequences she has been working on. The challenge was to make pictures inspired by Crina’s paintings and models.

Published 10 April 2018
Written by Marion Leeper
Creative Commons License

Manuscript detectives – submitted, accepted or published?

In the blog post “It’s hard getting a date (of publication)”, Maria Angelaki discussed how a seemingly straightforward task may turn into a complicated and time-consuming affair for our Open Access Team. As it turns out, it isn’t the only one. The process of identifying the version of a manuscript (whether it is the submitted, accepted or published version) can also require observation and deduction skills on par with Sherlock Holmes’.

Unfortunately, it is something we need to do all the time. We need to make sure that the manuscript we’re processing isn’t the submitted version, as only published or accepted versions are deposited in Apollo. And we need to differentiate between published and accepted manuscripts, as many  publishers – including the biggest players Elsevier, Taylor & Francis, Springer Nature and Wiley  – only allow self-archiving of accepted manuscripts in institutional repositories, unless the published version has been made Open Access with a Creative Commons licence.

So it’s kind of important to get that right… 

Explaining manuscript versions

Manuscripts (of journal articles, conference papers, book chapters, etc.) come in various shapes and sizes throughout the publication lifecycle. At the onset a manuscript is prepared and submitted for publication in a journal. It then normally goes through one or more rounds of peer-review leading to more or less substantial revisions of the original text, until the editor is satisfied with the revised manuscript and formally accepts it for publication. Following this, the accepted manuscript goes through proofreading, formatting, typesetting and copy-editing by the publisher. The final published version (also called the version of record) is the outcome of this. The whole process is illustrated below.

Identifying published versions

So the published version of a manuscript is the version… that is published? Yes and no, as sometimes manuscripts are published online in their accepted version. What we usually mean by published version is the final version of the manuscript which includes the publisher’s copy-editing, typesetting and copyright statement. It also typically shows citation details such as the DOI, volume and page numbers, and downloadable files will almost invariably be in a PDF format. Below are two snapshots of published articles, with citation details and copyright information zoomed in. On the left is an article from the journal Applied Linguistics published by Oxford University Press and on the right an article from the journal Cell Discovery published by Springer Nature (click to enlarge any of the images).

 

Published versions are usually obvious to the eye and the easiest to recognise. In a way the published version of a manuscript is a bit like love: you may mistake other things for it but when you find it you just know. In order to decide if we can deposit it in our institutional repository, we need to find out whether the final version was made Open Access with a Creative Commons (CC) licence (or in rarer cases with the publisher’s own licence). This isn’t always straightforward, as we will now see.

Published Open Access with a CC licence?

When an article has been published Open Access with a CC licence, a statement usually appears at the bottom of the article on the journal website. However as we want to deposit a PDF file in the repository, we are concerned with the Open Access statement that is within the PDF document itself. Quite a few articles are said to be Open Access/CC BY on their HTML version but not on the PDF. This is problematic as it means we can’t always assume that we can go ahead with the deposit from the webpage – we need to systematically search the PDF for the Open Access statement. We also need to make sure that the CC licence is clearly mentioned, as it’s sometimes omitted even though it was chosen at the time of paying Open Access charges.

The Open Access statement will appear at various places on the file depending on the publisher and journal, though usually either at the very end of the article or in the footer of the first page as in the following examples from Elsevier (left) and Springer Nature (right).

 

A common practice among the Open Access team is to search the file for various terms including “creative”, “cc”, “open access”, “license”, “common” and quite often a combination of these. But even this isn’t a foolproof method as the search may retrieve no result despite the search terms appearing within the document. The most common publishers tend to put Open Access statements in consistent places, but others might put them in unusual places such as in a footnote in the middle of a paper. That means we may have to scroll through a whole 30- or 40-page document to find them – quite a time-consuming process.

 Identifying accepted versions

The accepted manuscript is the version that has gone through peer-review. The content should be the same as the final published version, but it shouldn’t include any copy-editing, typesetting or copyright marking from the publisher. The file can be either a PDF or a Word document. The most easily recognisable accepted versions are files that are essentially just plain text, without any layout features, as shown below. The majority of accepted manuscripts look like this.

However sometimes accepted manuscripts may at first glance appear to be published versions. This is because authors may be required to use publisher templates at the submission stage of their paper. But whilst looking like published versions, accepted manuscripts will not show the journal/publisher logo, citation details or copyright statement (or they might show incomplete details, e.g. a copyright statement such as © 20xx *publisher name*). Compare the published version (left) and accepted manuscript (right) of the same paper below.

 

As we can see the accepted manuscript is formatted like the published version, but doesn’t show the journal and publisher logo, the page numbers, issue/volume numbers, DOI or the copyright statement.

So when trying to establish whether a given file is the published or accepted version, looking out for the above is a fairly foolproof method.

Identifying submitted versions

This is where things get rather tricky. Because the difference between an accepted and submitted manuscript lies in the actual content of the paper, it is often impossible to tell them apart based on visual clues. There are usually two ways to find out:

  • Getting confirmation from the author
  • Going through a process of finding and comparing the submission date and acceptance date of the paper (if available), mostly relevant in the case of arXiv files

Getting confirmation from the author of the manuscript is obviously the preferable and time-saving option. Unfortunately many researchers mislabel their files when uploading them to the system, describing their accepted/published version file as submitted (the fact that they do so when submitting the paper to us may partly explain this). So rather than relying on file descriptions, having an actual statement from the author that the file is the submitted version is better. Although in an ideal world this would never happen as everyone would know that only accepted and published versions should be sent to us.

A common incarnation of submitted manuscripts we receive is arXiv files. These are files that have been deposited in arXiv, an online repository of pre-prints that is widely used by scientists, especially mathematicians and physicists. An example is shown below.

Clicking on the arXiv reference on the left-hand side of the document (circled) leads to the arXiv record page as shown below.

The ‘comments’ and ‘submission history’ sections may give clues as to whether the file is the submitted or accepted manuscript. In the above example the comments indicate that the manuscript was accepted for publication by the MNRAS journal (Monthly Notices of the Royal Astronomical Society). So this arXiv file is probably the accepted manuscript.

The submission history lists the date(s) on which the file (and possible subsequent versions of it) was/were deposited in arXiv. By comparing these dates with the formal acceptance date of the manuscript which can be found on the journal website (if published), we can infer whether the arXiv file is the submitted or accepted version. If the manuscript hasn’t been published and there is no way of comparing dates, in the absence of any other information, we assume that the arXiv file is the submitted version.

Conclusion

Distinguishing between different manuscript versions is by no means straightforward. The fact that even our experienced Open Access Team may still encounter cases where they are unsure which version they are looking at shows how confusing it can be. The process of comparing dates can be time-consuming itself, as not all publishers show acceptance dates for papers (ring a bell?).

Depositing a published (not OA) version instead of an accepted manuscript may infringe publisher copyright. Depositing a submitted version instead of an accepted manuscript may mean that research that hasn’t been vetted and scrutinised becomes publicly available through our repository and possibly be mistaken as peer-reviewed. When processing a manuscript we need to be sure about what version we are dealing with, and ideally we shouldn’t need to go out of our way to find out.

Published 27 March 2018
Written by Dr Melodie Garnier
Creative Commons License

Plans for scholarly communication professional development

Well now there is a plan. The second meeting of the Scholarly Communication Professional Development Group was held on 9 October in the Jisc offices in London. This followed on from the first meeting in June about which there is a blog. The attendance list is again at the end of this blog.

The group has agreed we need to look at four main areas:

  • Addressing the need for inclusion of scholarly communication in academic library degree courses
  • Mapping scholarly communication competencies against training provision options
  • Creating a self assessment tool to help individuals decide if scholarly communication is for them
  • Costing out ‘on the job training’ as an option

What are the competencies in scholarly communication?

The group discussed the types of people in scholarly communication, noting that scholarly communication is not a traditional research support role either within research administration or in libraries. Working in scholarly communication requires the ability to present ideas and policies that are not always accepted or embraced by the research community.

The group agreed it would be helpful to identify what a successful scholarly communication person looks like – identifying the nature of the role, the types of skill sets and what the successful attributes are. The group has identified several examples of sets of competencies in the broad area of ‘scholarly communication’:

The group agreed it would be useful to review the NASIG Competencies and see if they map to the UK situation and to ask NASIG about how they are rolling it out across the US.

The end game that we are trying to get to is a suite of training products at various levels that as a community is going to make a difference to the roles we are recruiting.  We agreed it would be useful to explore how these frameworks relate to the various existing professional frameworks, such as CILIP, ARMA and Vitae. 

The approach is asking people: ‘Do you have a skills gap?’ rather than: ‘Do you (or your staff) need training?’. It would be helpful then, to develop a self assessment tool to allow people to judge their own competencies against the NASIG or COAR set (or an adaptation of these). The plan is to map the competencies against training provision options. 

Audiences

We have two audiences in terms of professional training in scholarly communication:

  1. New people coming into the profession – the initial training that occurs in library schools.
  2. Those people already in a research support environment who are taking on scholarly communication roles. 

The group also discussed scope. It would be helpful to consider how many people across the UK are affected by the need for support and training.

Another issue is qualifications over skills – there are people who are working in administrative roles who have expanded their skills but don’t necessarily have a qualification. Some libraries are looking at weighting past experience higher over qualifications. 

There needs to be a sense of equity if we were to introduce new requirements. While large research intensive institutions can afford professional development, in some places there is one person who has to do the scholarly communication functions as only part of their job – they are isolated and they don’t have funds for training. An option could be that if a training provision is to be ‘compliant’ with this group then it must allow some kind of free online training.

Initial training in library schools

As was discussed the previous time the group met, there is a problem in that library schools do not seem to be preparing graduates adequately for work in scholarly communication. Even the small number of graduates who have had some teaching in this area are not necessarily ready to hit the ground running and still need further development. The group agreed the sector needs to define how we skill library graduates for this detailed and complex area.

One idea that arose in the discussion was the suggestion we engage with library schools at their own conferences, perhaps asking to have a debate to ask them what they think they are doing to meet this need. 

The next conference of the library schools Association of Library and Information Science Educators is 6-9 February 2018 in Denver. Closer to home, iConference 2018 will be 25-28 March and will be jointly hosted by the UK’s University of Sheffield’s Information School and the iSchool at Northumbria. However, when we considered the conference options it became clear that this would not necessarily work, the focus of these conferences is academic focus, not practitioner or case studies. This might point to the source of some of the challenges we see in this space.

One of the questions was: what is really different now to the way it was 10-20 years ago? We need to survey people who are one or two years out from their qualifications.

Suggestions to address this issue included:

  • Identify which library schools are running a strand on academic librarianship and what their curriculum is
  • We work with those library schools which are trying to address this area, such as Sheffield, Strathclyde and UCL to try and identify examples of good practice of producing graduates who have the competencies we need
  • Integrate their students into ‘real life’, taking students in for a piece of work so they have experience

Professional Development option 1 – Institutional-based training

In the environment where there is little in the way of training options, ‘on the job’ training becomes the default. But is there a perception that on the job training comes without cost While the amount of training that happens in this environment is seen as cost neutral, it could be that sending someone on a paid for course could be more effective.

How much does it cost for us to get someone fully skilled using on the job training? There are time costs of both the new recruit and the loss of work time for the staff member doing the training. There is also the cost of the large amount of time spent recruiting staff because we cannot get people who are anywhere near up to speed. 

One action is to gain an understanding of how much it does actually cost to train a staff member up. 

Professional Development option 2 – Mentoring

There is an issue in scholarly communication with new people coming through continuously who need to be brought up to speed. One way of addressing this issue could be by linking people together. UKCORR are interested in creating some kind of mentoring system. ARMA also has a mentoring network which they are looking to relaunch shortly.

 The group discussed whether mentoring was something that can be brokered by an external group, creating an arrangement where if someone is new they can go and spend some time with someone else who is doing the same job. However, to do this we would need a better way of connecting with people. 

This idea ties into the work on institutional based training and the cost associated with it. We are aware there is a lot of cost in sharing and receiving info done by goodwill at present.

Professional Development option 3 – Community peer support events

Another way of getting people together is community and peer support, which is already part of this environment and could be very valuable. Between members of the group there are several events being held throughout the year. These range from free community events to paid for conferences. For example, Jisc is looking at running two to three community events each year. They recently trialled a webinar format to see if it is an opportunity to get online discussions going.

The group discussed whether we need more events, and what is the best way of supporting each other and what kind of remote methods could be used. There is a need to try and document this activity systematically.

Professional Development option 4 – Courses we can run now

The group agreed that while it might be too early for us to look at presenting courses, it would be useful to have an idea of who is offering what amongst the member organisations of the group and that we can start to glean a picture of what is covered. If we were to then map this to the competencies it helps decision making.

For example, UKSG have webinars on every month that are free which fulfils a need. Is there a topic we can put on for an hour?

 UKSG is planning a course towards the end of next year – a paid seminar face to face, outlining the publication process, particularly from the open access environment. This could be useful to publishers as well. It explains what needs to happen in a sequence of events – why it is important to track submission and acceptance dates. Pitching it to people who are new in the role and at senior managers who are responsible for staffing.

Professional Development option 5 – Private providers

Given the pull on resources for many in this sector we need to consider promoting and creating accessible training for all. So in that context the discussion moved to whether we were prepared to promote private training providers. This is a tricky area because there is such a range under the banner ‘private’ – from freelance trainers, to organisations who train as their primary activity to organisations who offer training as part of their wider suite of activities. Any training provision needs to look at sustainability, it isn’t always possible to rely on the goodwill of volunteers to deliver staff development and training.

For example, UKSG as an organisation is not profit-making — it is a charity and events are run on a non-profit basis. Jisc is looking at revenue on a non-profit basis to feed into Jisc’s support for the sector. ARMA work on a cost recovery basis – ARMA events are always restricted to members. Many of the member groups engage with private providers and pay them to come along and speak for the day.

We agreed that when we look at developing the competencies framework and identify how someone can achieve these skills we should be linking to all training provision, either through a paid course, online webinar or mentoring.  The group agreed we are not excluding private providers from the discussion. We are looking to get the best provision for the sector.

However, the topic came up about our own expertise. Experts working in the field already give talks at many events on work time, which is being paid for by their employer — who are in effect subsidising the cost of running the training or event. Can we use our own knowledge base to share this information amongst the community? Perhaps it is not about what you pay, it is what you provide into the community. 

Opening up the discussion

The group talked about tapping into existing conferences held by member organisations of the group to specifically look at this issue ‘branded’ under the umbrella of the group.  To ensure inclusion it would be good to have a webinar as part of the discussion at each of these conference so people who are not there can attend and contribute. Identified conferences were:

We also need to address other groups involved in the scholarly communication process within institutions, such as research managers, researcher developers and researchers themselves.

Next steps

  • Engaging with library schools to discuss the need for inclusion of scholarly communication in their academic library degree courses, possibly looking at examples of good practice
  • Discussion with NASIG about rolling out their scholarly communication competencies
  • Mapping scholarly communication competencies against current training provision options
  • Creating a self assessment tool to help individuals decide if scholarly communication is for them
  • Costing out ‘on the job training’ to evaluate the impact of this on the existing team

Attendees

  • Helen Blanchett – Jisc
  • Fiona Bradley – RLUK 
  • Sarah Bull – UKSG 
  • Helen Dobson – Manchester University 
  • Anna Grigson representing UKSG
  • Danny Kingsley – Cambridge University
  • Valerie McCutcheon – representing ARMA
  • Ann Rossiter – SCONUL
  • Claire Sewell – Cambridge University
  • Nick Shepherd – representing UKCoRR

 Published 27 November 2017
Written by Dr Danny Kingsley
Creative Commons License