The Biotechnical and Biological Sciences Research Council (BBSRC) Data Sharing Policy states that research data that supports publications must be stored for 10 years and adherence to data management plans will be monitored and built into the Final Report score, which may be taken into account for future proposals.
Recently Michael Ball, the Strategy and Policy Manager at BBSRC accepted an invitation to Cambridge University to discuss the BBSRC policy on opening up access to data. Senior members of the University, the School of Biological Sciences, the Research Office and the Office of Scholarly Communications attended. These notes have been verified by Michael as an accurate reflection of the discussion.
The take home messages from the meeting were the importance of:
- Disciplines themselves establishing ways of dealing with data
- Thinking about how to deal with data from the beginning of a research project
The meeting began with a discussion about the support we provide Cambridge University researchers through the Research Data Service , the resources provided on the data website and the enthusiastic uptake of the service since the beginning of the year.
The conversation then moved into issues around the policy, focusing on several aspects – clarification of what needs to be shared, how this will be supported financially, questions about auditing, a discussion about the best place to keep the data and issues with data sharing in the biological sciences.
What data are we expected to share?
What is ‘supporting data’ in the biological sciences?
One of the biggest concerns biological researchers have about data sharing is what is meant by ‘data’. Biology has the most diverse group of data, which makes it hard to talk about biology because the issues are project and problem specific.
Michael confirmed the policy broadly refers to all data ‘but the devil is in the detail, there are lots of caveats’. He echoed Ben Ryan in answer to a similar question of the EPSRC policy by saying the key points are:
- What would you expect to see?
- What do you think is important?
The interpretation of the BBSRC policy depends heavily on the types of data being produced. Much is dependent on the expected norms, what a researcher would expect to see if they were trying to interpret the paper. What are the underlying supporting data for the paper?
The biological sciences throw up a particular challenge in the range and disparity in disciplinary norms. For example a great deal of data arises from genomics and some time ago they made the decision to share, including making decisions about what to share and what not to share. However, there are vast areas of experimental science where the paper itself is data.
The policy is going one step further back from the published paper towards the lab. In the future these data policies might go further back, if there was greater automation of the research process.
Michael confirmed that if the BBSRC has funded a PhD student they would expect them to make supporting data available.
What do we need to share in the Biological Sciences?
There is no expectation to share lab books unless they are the only place the data exists. Michael noted that when the BBSRC wrote the policy it excluded lab books and organisms.
However there is an expectation to share instrumental output. This is with the caveat that if it is output from an instrument that goes through some sort of amendment then you don’t need to share the original.
An example: A researcher is counting bacteria on a plate and scrupulously making notes in lab books before entering this information put into a computer spreadsheet to crunch the numbers. The expectation would be to share the spreadsheet not the lab book.
Some research requires the construction of a piece of technology where there might not be a great deal of associated data around it. In these instances it is the process of construction or the protocol or the methodology that is important to share.
Michael noted that in some disciplines, given the materials and input parameters and the same instruments, the output data will be the same each time. In these circumstances it is most sensible to share or describe the inputs and repeat the experiments. The question is about what would be the most useful to share.
Show me the money
A stitch in time
Michael confirmed that researchers can ask for the money they need (and can justify) for research data management in grant applications. He did say however that the BBSCR does not ‘generally see a lot of these requests’. He noted that this is because often people haven’t thought about the data they will generate at the start of the project. One of the researchers pointed out it was difficult to know how to fund it because ‘we are not sure what we need’. However, this should not be a reason to ask for nothing.
It may be that some of the discipline specific repositories will have to change their business models in the future to cope with larger data sets.
Michael said that it is worth thinking about data sharing at the project planning stage because different types of data have different requirements. Researchers might need to allow for the cost of getting the data in the right format and metadata. It is advisable to think about where the data will be published so the research team can prepare the data in the first instance.
Michael said that the data management plan should hopefully prompt how much data a research project will produce. It is advisable to consider the maximum amount of data the project may produce. The ideal situation will be to have an ongoing data management plan because in some ways it is useful at the end.
Longer term financial support
Raised in the meeting was the option of charging a flat fee up front regardless of the data being generated. The question arose about whether there was any danger in auditing with this approach? The problem with an up front fee is it becomes more difficult to track and output from a specific grant against what we put into the database. There is a directly incurred and directly allocated component to the cost.
Michael confirmed that any money allocated to data management won’t survive past the end of the grant. He noted this was something that he was ‘not sure how to unpick’. This raises the issue of the cost of longer term data sharing. The BBSRC provides funding to a certain point in time. There can be a secondary experiment funded by someone else and the works are published together. But the researcher can only share the data from the funded part. The BBSRC does not ask researchers to share data that they haven’t funded.
Who is in charge here?
The academics raised the concern that there could be ‘mission creep’ where the funders expect people to do things that are a waste of time. They mentioned that an ideal situation would be where the research community decide what they want to share and what they don’t wish to share.
Michael noted that the BBSRC has to be guided by the community on their own community norms for data sharing, and this is why aspects of the data sharing policy is quite open. He noted that this meeting represented the first part of the process – where the funder comes together with communities to decide what is essential.
In addition, many journals are now requiring open data. It is the funders, the researchers and the journals who are asking for it. To some extent the BBSRC policy is guided by what the journals are asking for.
The policing process
The group expressed interest in how the BBSRC policy is policed and what would be the focus of that policing. Michael stated that BBSRC are investigating options of how to monitor compliance, but that it does not currently appear feasible to to check all of the submissions. BBSRC will monitor compliance, but will probably start with dipstick testing. They will look at historical projects and see where the process goes from there. In practice, this is likely to initially involve examining the degree of adherence to the submitted data management plans. If a researcher has acted reasonably and justified their mechanisms of data sharing, then it is unlikely that there would be any actions beyond noting where difficulties had occurred.
Note, however that if a researcher has submitted a grant application with a data sharing statement there is a reasonable expectation to share the data.
Ultimately the data release will be policed. In areas where data sharing is prevalent, communities police themselves because researchers ask and expect the data to be available. In some cases you can’t publish without an accession number.
Michael noted there are places researchers can put information about published data into ResearchFish. ResearchFish is currently the only mechanism to capture information regarding post-award activities.
Where do we put the data?
The question arose about how other universities are managing the policy. Michael responded that many have started institutional repositories. The institutional response depends on where the majority of their research sits.
A possible solution for ensuring the data is discoverable would be a catalogue of what is stored in an institutional repository, with metadata about the data. That metadata would itself need to be discoverable. If the data is being held in a centralised repository it is possible to pay the cost upfront before the end of the grant.
The group noted there was a publishing preference for discipline specific repositories over institutional repositories because the community knows how to look after the work. These repositories are hosted by ‘people who know what they are doing’. They are discoverable, where the community can decide on the metadata and the required standards.
Michael agreed that the ideal was open discoverability. The question is what will be practically possible.
A way of considering the question is asking how would another researcher find the information? If the data is available from a researcher by request this should be noted in the paper. If it is available in a repository then the paper should state that. If the journal has told readers where the data is, then it should be self-evident.
Issues with obsolescence
Michael noted that there is an ongoing issue of obsolete data formats and disks. Given there are ideals and reality, it becomes a question of how to store and handle the information.
When data exists in a proprietary format, the researcher needs to think about how to access it in the longer term. What if the organisation goes out of business? Or the technology upgrades so you can’t get hold of the data in an earlier format? If data exists in a physical format then it is possible to go back and read it. However, if not then it is quite important to think about issues relating to long-term access. Lots of data will be obsolete.
There are some solutions for this issue. The Open Microscopy Environment is a joint project between universities, research establishments, industry and the software development community. It develops open-source software and data format standards for the storage and manipulation of biological microscopy data. This is a community-generated solution as a recognised problem. It has a database that you can upload any file format.
Issues with data sharing in the biological sciences
The BBSRC allows a reasonable embargo until the researcher has exploited the data for publication. If the researcher is planning on releasing further publications then they should consider carefully when to release the data., Michael noted, this is ‘not a forever thing’. The BBSRC do say there are reasonable limits, and some journals will expect data to be released alongside publications.
Data emerging from BBSRC funded research needs to be shared unless there is a reason why not – and commercial partners who need to protect their intellectual property can be a good reason to delay data sharing. However once the Intellectual Property is protected, it is protected. The BBSRC allows researchers to embargo the data.
Michael also noted there are things that can be done with data, for example releasing it under license. An example is, if a researcher is working with a commercial partner who is concerned about other commercial competitors, it would be possible to require people to sign non-disclosure agreements. There are ways to deal with commercial data, as you would with other intellectual products.
It was noted by the researchers in the meeting that this type of arrangement is likely to mean the company doesn’t want to go through the process and won’t collaborate.
If data was generated before the policy was in place then the researcher has not submitted a grant application that requires them to share their data. The BBSRC is not expecting people to go back into history. Those researchers who wish to share historical research are not discouraged but this is not covered by the policy. The policy came into force in April 2007, however realistically it started in 2008.
In addition there are reasonable grounds for not sharing clearly incorrect or poor quality data. Many disciplinary databases will contain an element of quality control. But Michael noted that the policy shouldn’t be a way for people to filter out inconvenient data and would expect the community to be self policing.
Future policy direction
Michael noted that this type of policy is becoming more prevalent not less. Open science is one of the Horizon 2020 themes – see the 2013 Guidelines on Open Access to Scientific Publications and Research Data in Horizon 2020. Journals are getting involved as well. In the future sharing data will be more common – and driven by disciplinary norms. Anything that has been funded by RCUK will be required to share. It makes sense to government – the US National Institutes of Health and National Science Foundation have data sharing statements.
Continuing the dialogue
Michael indicated that he wants to talk to people about what the questions are so the BBSRC can refine issues in the policy.
Researchers who have questions about the policy can send them through to the Research Data Service team firstname.lastname@example.org. If we are unable to answer them, we can ask BBSRC directly for clarification. We will then add the information to the University Research Data Management FAQ webpage.
Published 19 October 2015
Written by Dr Danny Kingsley, verified by Michael Ball, BBSRC